Synthetic Superheroes Battle Superbugs

Researchers at Stanford University’s Department of Bioengineering have successfully created synthetic anti-microbial molecules that function as broad-spectrum antibiotics that disrupt bacterial membranes but leave mammalian cells intact. These molecules, called peptoids, may lead to an way of stemming the ever-growing menace of drug-resistant bacterial infections, which, by some estimates, are responsible for more US deaths than AIDS.

“Peptoids could be an entirely new class of antibiotic drugs, which would be hugely important,” said Annelise Barron, associate professor of bioengineering at Stanford and senior author of a paper describing the research in the Feb. 26 issue of Proceedings of the National Academy of Sciences.
Anti-microbial peptides are evolutionarily ancient infection fighters found in organisms from grasses to amphibians to humans. In the human body, the peptides show up in the mouth, lungs and intestines, and in body fluids like sweat and tears. Anti-microbial peptides target a variety of pathogens and generally kill by punching holes in the invaders’ cell membranes.
“You can think of these types of antibiotics as the body’s ‘land mines’ against invading pathogens,” Barron said.
Because of this, bacterial resistance to the peptides is rarely observed. Bacteria can thwart other anti-microbial drugs by inactivating the drug, pumping it out of the cell, altering the drug’s binding site so it is no longer recognized or working around the specific cell part attacked by the drug.
But it is much tougher for bacteria to develop resistance to the damage caused by anti-microbial peptides. “The bacteria can’t fundamentally alter their entire outer membrane,” Barron said.
…Peptoids are synthetic molecules–oligomers–with structures that are similar to those of anti-microbial peptides, and offer the potential to overcome many of the problems associated with the natural molecules. Peptoids are much less susceptible to degradation in the stomach and bloodstream than peptides, so they will last longer in the body. They are also less expensive to produce than peptides, Barron said.
Barron and her colleagues had these peptoids tested against six strains of pathogenic bacteria. The peptoids showed anti-bacterial properties almost identical to those of the natural peptides.
“They did beautifully,” Barron said. “They appear to be broad-spectrum antibiotics that interact and interfere with bacterial cell membranes analogously to the way these peptides do.”
To see if the peptoids would be harmful to human cells, the researchers combined them with human red blood cells in the laboratory. They also mixed them with mammalian lung cells and skin cells. At their active concentrations, the peptoids left the mammalian cells unharmed.

Press Release: Synthetic peptoids hold forth promise for new antibiotics
Abstract: Peptoids that mimic the structure, function, and mechanism of helical antimicrobial peptides
Image credit: Wellcome Images: Clostridium on gut lining
NOTE: Please welcome Ms Kapa Lenkov, a graduate student at the Dept. of Biology at Stanford, as our new editor. This is her first post for Medgadget. She will be reporting on some of the most interesting news coming out of bench research. Her particular interests are in the following areas of biology: neuroscience, behavior and epigenetics.